Commit Graph

2300 Commits

Author SHA1 Message Date
Tim Besard
08804a06d2
Merge pull request #916 from FluxML/tb/runtime_use_cuda
Check for CUDA availability at run time.
2019-11-06 09:46:39 +01:00
Tim Besard
c9f369de86 Update packages. 2019-11-06 07:53:20 +01:00
Tim Besard
6e8f8c1f46 Use latest GPU CI templates. 2019-11-04 16:41:57 +01:00
Tim Besard
916d3dabbd Bump Julia version. 2019-11-04 15:51:33 +01:00
Tim Besard
33d276cdb7 Fix GPU-less tests. 2019-11-04 15:51:33 +01:00
Tim Besard
dbcdf4d1bd Bump GPU packages. 2019-11-04 15:51:33 +01:00
Tim Besard
a82b76cf24 Conditionally include the CUDNN glue code. 2019-11-04 15:27:11 +01:00
Tim Besard
39ab740fb7 Check for CUDA availability at run time. 2019-11-02 11:18:06 +01:00
bors[bot]
7104fd9332
Merge #907
907: Change `gate` function to `view` instead of copy r=MikeInnes a=janEbert

This speeds up code with large inputs by quite a lot. I only added it to the function accepting an `AbstractVector` as input as copying matrices may be faster than viewing them due to caching (they are sliced per row so will the data will not necessarily have a low stride).

Co-authored-by: janEbert <janpublicebert@posteo.net>
2019-10-24 11:06:41 +00:00
janEbert
7b41bc4ab5 Change gate function to view instead of copy
Only for vector input as copying a matrix may be more efficient due to
caching. A matrix is sliced per row, meaning the view will not be
aligned.
2019-10-24 12:45:22 +02:00
bors[bot]
645aa04464
Merge #898
898: Fix problem in crossentropy breaking GPU compilation r=MikeInnes a=kshyatt

Trying to run this simple example
```
using Flux, CuArrays
using Flux: crossentropy
model = Chain(
        Dense(728, 128, σ),
        LSTM(128, 256),
        LSTM(256, 128),
        Dense(128, 10),
        softmax) |> gpu
data = [rand(728) for i in 1:100];
out  = [rand(10) for i in 1:100];
loss(x, y) = crossentropy(model(x), y);
Flux.train!(loss, params(model), zip(gpu.(data), gpu.(out)), ADAM())
```
Old version of `crossentropy`:
```
ERROR: GPU compilation of #23(CuArrays.CuKernelState, CUDAnative.CuDeviceArray{Float32,1,CUDAnative.AS.Global}, Base.Broadcast.Broadcasted{Nothing,Tuple{Base.OneTo{Int64}},typeof(*),Tuple{Base.Broadcast.Extruded{Array{Float32,1},Tuple{Bool},Tuple{Int64}},Base.Broadcast.Broadcasted{Base.Broadcast.ArrayStyle{CuArray},Nothing,typeof(conj),Tuple{Base.Broadcast.Extruded{CUDAnative.CuDeviceArray{Float32,1,CUDAnative.AS.Global},Tuple{Bool},Tuple{Int64}}}}}}) failed
KernelError: passing and using non-bitstype argument

Argument 4 to your kernel function is of type Base.Broadcast.Broadcasted{Nothing,Tuple{Base.OneTo{Int64}},typeof(*),Tuple{Base.Broadcast.Extruded{Array{Float32,1},Tuple{Bool},Tuple{Int64}},Base.Broadcast.Broadcasted{Base.Broadcast.ArrayStyle{CuArray},Nothing,typeof(conj),Tuple{Base.Broadcast.Extruded{CUDAnative.CuDeviceArray{Float32,1,CUDAnative.AS.Global},Tuple{Bool},Tuple{Int64}}}}}}.
That type is not isbits, and such arguments are only allowed when they are unused by the kernel.  .args is of type Tuple{Base.Broadcast.Extruded{Array{Float32,1},Tuple{Bool},Tuple{Int64}},Base.Broadcast.Broadcasted{Base.Broadcast.ArrayStyle{CuArray},Nothing,typeof(conj),Tuple{Base.Broadcast.Extruded{CUDAnative.CuDeviceArray{Float32,1,CUDAnative.AS.Global},Tuple{Bool},Tuple{Int64}}}}} which is not isbits.
    .1 is of type Base.Broadcast.Extruded{Array{Float32,1},Tuple{Bool},Tuple{Int64}} which is not isbits.
      .x is of type Array{Float32,1} which is not isbits.


Stacktrace:
 [1] check_invocation(::CUDAnative.CompilerJob, ::LLVM.Function) at /mnt/home/khyatt/.julia/dev/CUDAnative/src/compiler/validation.jl:70
 [2] macro expansion at /mnt/home/khyatt/.julia/dev/CUDAnative/src/compiler/driver.jl:187 [inlined]
 [3] macro expansion at /mnt/home/khyatt/.julia/packages/TimerOutputs/7zSea/src/TimerOutput.jl:216 [inlined]
 [4] #codegen#136(::Bool, ::Bool, ::Bool, ::Bool, ::Bool, ::typeof(CUDAnative.codegen), ::Symbol, ::CUDAnative.CompilerJob) at /mnt/home/khyatt/.julia/dev/CUDAnative/src/compiler/driver.jl:186
 [5] #codegen at ./none:0 [inlined]
 [6] #compile#135(::Bool, ::Bool, ::Bool, ::Bool, ::Bool, ::typeof(CUDAnative.compile), ::Symbol, ::CUDAnative.CompilerJob) at /mnt/home/khyatt/.julia/dev/CUDAnative/src/compiler/driver.jl:47
 [7] #compile#134 at ./none:0 [inlined]
 [8] #compile at ./none:0 [inlined] (repeats 2 times)
 [9] macro expansion at /mnt/home/khyatt/.julia/dev/CUDAnative/src/execution.jl:389 [inlined]
 [10] #cufunction#176(::Nothing, ::Base.Iterators.Pairs{Union{},Union{},Tuple{},NamedTuple{(),Tuple{}}}, ::typeof(CUDAnative.cufunction), ::GPUArrays.var"#23#24", ::Type{Tuple{CuArrays.CuKernelState,CUDAnative.CuDeviceArray{Float32,1,CUDAnative.AS.Global},Base.Broadcast.Broadcasted{Nothing,Tuple{Base.OneTo{Int64}},typeof(*),Tuple{Base.Broadcast.Extruded{Array{Float32,1},Tuple{Bool},Tuple{Int64}},Base.Broadcast.Broadcasted{Base.Broadcast.ArrayStyle{CuArray},Nothing,typeof(conj),Tuple{Base.Broadcast.Extruded{CUDAnative.CuDeviceArray{Float32,1,CUDAnative.AS.Global},Tuple{Bool},Tuple{Int64}}}}}}}}) at /mnt/home/khyatt/.julia/dev/CUDAnative/src/execution.jl:357
 [11] cufunction(::Function, ::Type) at /mnt/home/khyatt/.julia/dev/CUDAnative/src/execution.jl:357
 [12] macro expansion at /mnt/home/khyatt/.julia/dev/CUDAnative/src/execution.jl:174 [inlined]
 [13] macro expansion at ./gcutils.jl:91 [inlined]
 [14] macro expansion at /mnt/home/khyatt/.julia/dev/CUDAnative/src/execution.jl:171 [inlined]
 [15] _gpu_call(::CuArrays.CuArrayBackend, ::Function, ::CuArray{Float32,1}, ::Tuple{CuArray{Float32,1},Base.Broadcast.Broadcasted{Nothing,Tuple{Base.OneTo{Int64}},typeof(*),Tuple{Base.Broadcast.Extruded{Array{Float32,1},Tuple{Bool},Tuple{Int64}},Base.Broadcast.Broadcasted{Base.Broadcast.ArrayStyle{CuArray},Nothing,typeof(conj),Tuple{Base.Broadcast.Extruded{CuArray{Float32,1},Tuple{Bool},Tuple{Int64}}}}}}}, ::Tuple{Tuple{Int64},Tuple{Int64}}) at /mnt/home/khyatt/.julia/dev/CuArrays/src/gpuarray_interface.jl:60
 [16] gpu_call at /mnt/home/khyatt/.julia/dev/GPUArrays/src/abstract_gpu_interface.jl:151 [inlined]
 [17] gpu_call at /mnt/home/khyatt/.julia/dev/GPUArrays/src/abstract_gpu_interface.jl:128 [inlined]
 [18] copyto! at /mnt/home/khyatt/.julia/dev/GPUArrays/src/broadcast.jl:48 [inlined]
 [19] copyto! at ./broadcast.jl:863 [inlined]
 [20] copy at ./broadcast.jl:839 [inlined]
 [21] materialize at ./broadcast.jl:819 [inlined]
 [22] (::Zygote.var"#1310#1311"{CuArray{Float32,1},CuArray{Float32,1}})(::Array{Float32,1}) at /mnt/home/khyatt/.julia/dev/Zygote/src/lib/broadcast.jl:68
```
New version:
```
julia> Flux.train!(loss, params(model), zip(gpu.(data), gpu.(out)), ADAM())

julia> # everyone finished happily and went on with their lives
```

Co-authored-by: Katharine Hyatt <khyatt@flatironinstitute.org>
2019-10-23 14:31:53 +00:00
Katharine Hyatt
8913c9c741 Make the vector of weights test pass on GPU 2019-10-23 09:53:09 -04:00
Katharine Hyatt
f7ce717aaa Add tests 2019-10-23 09:22:22 -04:00
Katharine Hyatt
e0c1c0e057 Fix problem in crossentropy breaking GPU compilation 2019-10-22 14:00:57 -04:00
bors[bot]
fa5737fb5c
Merge #904
904: Documenting Optimiser Interface r=MikeInnes a=MikeInnes

I needed to add one extra commit to #875 before merging.

Co-authored-by: Dhairya Gandhi <dhairya@juliacopmuting.com>
Co-authored-by: Dhairya Gandhi <dhairya@juliacomputing.com>
Co-authored-by: Mike Innes <mike.j.innes@gmail.com>
2019-10-22 12:38:19 +00:00
Mike Innes
7ead2d6c7b typo 2019-10-22 13:36:39 +01:00
Dhairya Gandhi
a9955fec8a correct train! syntax 2019-10-22 16:25:55 +05:30
bors[bot]
b03f34dcb6
Merge #902
902: Backticks and examples for normalise r=MikeInnes a=kshyatt



Co-authored-by: Katharine Hyatt <khyatt@flatironinstitute.org>
2019-10-21 14:35:45 +00:00
Katharine Hyatt
b8b4bc48b9 Backticks and examples for normalise 2019-10-21 10:31:44 -04:00
Dhairya Gandhi
776023ddad fixes 2019-10-10 20:35:28 +05:30
Dhairya Gandhi
4477dd8d54 reviews 2019-10-10 20:27:11 +05:30
Dhairya Gandhi
a55878453c
typo
Co-Authored-By: Mike J Innes <mike.j.innes@gmail.com>
2019-10-10 20:16:29 +05:30
Dhairya Gandhi
623ee2c29c
typo
Co-Authored-By: Mike J Innes <mike.j.innes@gmail.com>
2019-10-10 20:16:00 +05:30
Dhairya Gandhi
f19066ee29 more docstrings 2019-10-10 16:48:12 +05:30
Dhairya Gandhi
fe52689cfe in depth docstrings 2019-10-09 16:16:11 +05:30
dsweber2
3b7b780d39 super simple test 2019-10-08 23:04:31 -07:00
bors[bot]
af0dcb2c63
Merge #882
882: Check if CUDA availability changed during init. r=MikeInnes a=maleadt

With this PR, Flux checks using CUDAapi if CUDA is available during initialization, and forces recompilation if that does not agree with what was decided during precompilation. This avoids the scenario where Flux was precompiled without GPU support, consequently not allowing use of the GPU even if the user fixed his CUDA/GPU set-up because that does not force recompilation (and we can't add precompilation dependencies on stuff that doesn't exist).

However, we can't do the same for the case where we have a GPU/CUDA but CuArrays fails to import (checking if it imports during `__init__` would be much too expensive, if even possible), so this PR removes support for having CUDA/a GPU but CuArrays being broken. That's a little risky now that Flux depends on CuArrays, but the package is pretty mature and I haven't seen many bug reports failing to load it recently.

Fixes https://github.com/FluxML/Flux.jl/pull/852#issuecomment-538028314

cc @MikeInnes @xukai92

Co-authored-by: Tim Besard <tim.besard@gmail.com>
2019-10-08 13:24:49 +00:00
Dhairya Gandhi
b503741651 expanded docstrings 2019-10-04 14:46:03 +05:30
Tim Besard
8aea15e6e0 Demote to const variables. 2019-10-03 21:28:55 +02:00
Tim Besard
2369b2b3fd Add an environment variable to disable CUDA usage. 2019-10-03 21:27:54 +02:00
Tim Besard
63d196aa37 Check if CUDA availability changed during init. 2019-10-03 20:05:32 +02:00
bors[bot]
0d3aa8fa5e
Merge #877
877: Fix functor's `params!` to work with complex numbers r=MikeInnes a=PhilipVinc

I believe you forgot to define `params!` for complex-valued arrays.

If I'm wrong, feel free to close this.

Co-authored-by: Filippo Vicentini <filippovicentini@gmail.com>
2019-10-01 15:11:55 +00:00
Filippo Vicentini
606fe58854
Use <:Number 2019-09-29 12:33:02 +02:00
Filippo Vicentini
14e94c291e
Make it actually work 2019-09-29 12:28:01 +02:00
Filippo Vicentini
d91677f651
Fix params! to work with complex numbers 2019-09-29 12:23:41 +02:00
Dhairya Gandhi
8013c728b1 clearer optimiser docstrings 2019-09-28 16:09:00 +05:30
Dhairya Gandhi
0175485a80 fixup 2019-09-27 22:08:25 +05:30
Dhairya Gandhi
8bb0db7d0c opt docstrings 2019-09-27 22:04:53 +05:30
Dhairya Gandhi
32ac71734d optimiser interface docs 2019-09-27 21:43:59 +05:30
Dhairya Gandhi
a98a1b8bb5 fixes 2019-09-27 21:43:39 +05:30
bors[bot]
e2b93bc78a
Merge #874
874: Move CUDNN wrappers to CuArrays r=MikeInnes a=MikeInnes



Co-authored-by: Tim Besard <tim.besard@gmail.com>
Co-authored-by: Mike Innes <mike.j.innes@gmail.com>
2019-09-27 14:05:37 +00:00
Mike Innes
b90b02872f Merge branch 'master' into tb/cuarrays_dnn 2019-09-27 14:58:32 +01:00
Mike Innes
e287982b78 use CuArrays master 2019-09-27 14:55:30 +01:00
Mike Innes
691a29cf32 cudnn bug is fixed 2019-09-27 14:15:58 +01:00
Mike Innes
46bc8e5e64 move pullbacks to CuArrays 2019-09-26 17:14:18 +01:00
bors[bot]
12bc06136d
Merge #870
870: Fix printing of SkipConnection r=MikeInnes a=mcabbott

Before:
```
julia> SkipConnection(Dense(2,2),+)
SkipConnection(Error showing value of type SkipConnection:
ERROR: MethodError: no method matching iterate(::Dense{typeof(identity),TrackedArray{…,Array{Float32,2}},TrackedArray{…,Array{Float32,1}}})

julia> SkipConnection(Chain(Dense(2,3), Dense(3,2), LayerNorm(2)),+)
SkipConnection(Dense(2, 3), Dense(3, 2), LayerNorm(2))

julia> SkipConnection(Dense(2, 3), Dense(3, 2), LayerNorm(2))
ERROR: MethodError: no method matching SkipConnection(::Dense{typeof(identity),TrackedArray{…,Array{Float32,2}},TrackedArray{…,Array{Float32,1}}}, ::Dense{typeof(identity),TrackedArray{…,Array{Float32,2}},TrackedArray{…,Array{Float32,1}}}, ::LayerNorm{TrackedArray{…,Array{Float32,1}}})
```
After:
```
julia> SkipConnection(Dense(2,2),+)
SkipConnection(Dense(2, 2), +)

julia> SkipConnection(Chain(Dense(2,3), Dense(3,2), LayerNorm(2)),+)
SkipConnection(Chain(Dense(2, 3), Dense(3, 2), LayerNorm(2)), +)

julia> SkipConnection(Dense(2,2), (a,b) -> a .+ b./2)
SkipConnection(Dense(2, 2), #9)
```

Co-authored-by: Michael Abbott <32575566+mcabbott@users.noreply.github.com>
2019-09-25 14:09:28 +00:00
Michael Abbott
806e0c5c57 line 2019-09-25 15:20:13 +02:00
Michael Abbott
4245d9acad eg 2019-09-25 15:18:40 +02:00
Michael Abbott
2de84ce79f simplify 2019-09-25 13:59:32 +02:00
Michael Abbott
1a1a96571a +Chain 2019-09-25 13:47:29 +02:00